三维重建 PyQt Python VTK 医学图像的可视化 vtkImageView2三视图(横断面,冠状面,矢状面)
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概述:
本文实现了 Python C++ 版本 的 四视图,MPR 和 三维重建;同时有C++ Qt版本
效果展示:
视频展示:
VTK四视图
vtkImageViewer2
一个方便易用的2D图像显示类,它封装了vtkRenderWindow, vtkRender, vtkImageActor和vtkImageMapToWinowLevelColors。同时,包含了一个vtkInteractorStyleImage的交互方式,使得显示和交互变得更加简单。
3D医学图像有很多,不仅只有CT,还有MRI,超声波,X-光等,各具有独特的诊断优势。下面以CT图像数据作为示例:
效果:
1. DICOM 数据读取
reader = vtk.vtkDICOMImageReader() reader.SetDirectoryName("D:/datasource/fei/ScalarVolume_13") reader.Update()
设置imageViewer
可以设置slice,3维数据的方向,以及窗口大小、窗宽、窗位等等
imageviewer = vtk.vtkImageViewer2() imageviewer.SetInputConnection(reader.GetOutputPort()) interactor = vtk.vtkRenderWindowInteractor() imageviewer.SetupInteractor(interactor) # 添加交互器 # imageviewer.SetSize(400, 400) imageviewer.SetColorLevel(100) # 窗位 imageviewer.SetColorWindow(3000) # 窗宽 imageviewer.SetSliceOrientationToXY() # 设置切片方向为XY imageviewer.SetSlice(imageviewer.GetSliceMin()) # 设置切片起始位置为切片最小值
all code; 可以设置 :横断面,冠状面,矢状面
import vtkreader = vtk.vtkDICOMImageReader()reader.SetDirectoryName("CT")reader.Update() imageviewer = vtk.vtkImageViewer2()imageviewer.SetInputConnection(reader.GetOutputPort())interactor = vtk.vtkRenderWindowInteractor()imageviewer.SetupInteractor(interactor)#添加交互器#imageviewer.SetSize(400, 400)imageviewer.SetColorLevel(100)#窗位imageviewer.SetColorWindow(3000)#窗宽imageviewer.SetSliceOrientationToXY()#设置切片方向为XYimageviewer.SetSlice(imageviewer.GetSliceMin())#设置切片起始位置为切片最小值#imageviewer.SetSliceOrientationToXZ() #imageviewer.SetSliceOrientationToYZ() #print(imageviewer.GetSliceOrientation())#打印切片方向,XY为2,XZ为1,YZ为0imageviewer.Render()interactor.Start()
Using vtkResliceImageViewer or vtkImageViewer2 with Python3+PyQt5
import sysimport vtkfrom PyQt5 import QtCore, QtGuifrom PyQt5 import QtWidgetsfrom vtk.qt.QVTKRenderWindowInteractor import QVTKRenderWindowInteractorclass MainWindow(QtWidgets.QMainWindow): def __init__(self, parent = None): QtWidgets.QMainWindow.__init__(self, parent) self.frame = QtWidgets.QFrame() self.vl = QtWidgets.QVBoxLayout() self.vtkWidget = QVTKRenderWindowInteractor(self.frame) self.vl.addWidget(self.vtkWidget) pathDicomDir = "/path/to/dicom/data" reader = vtk.vtkDICOMImageReader() reader.SetDirectoryName(pathDicomDir) reader.Update() self.viewer = vtk.vtkImageViewer() # self.viewer = vtk.vtkImageViewer2() # self.viewer = vtk.vtkResliceImageViewer() self.viewer.SetInputData(reader.GetOutput()) self.viewer.SetupInteractor(self.vtkWidget) self.viewer.SetRenderWindow(self.vtkWidget.GetRenderWindow()) self.viewer.Render() self.frame.setLayout(self.vl) self.setCentralWidget(self.frame) self.show()if __name__ == "__main__": app = QtWidgets.QApplication(sys.argv) window = MainWindow() sys.exit(app.exec_())
C++:
#include "vtkSmartPointer.h"#include "vtkObjectFactory.h"#include "vtkRenderWindow.h"#include "vtkGenericRenderWindowInteractor.h"#include "vtkRenderer.h"#include "vtkActor.h"#include "vtkDICOMImageReader.h"#include "vtkImageViewer2.h"#include "vtkInteractorStyleImage.h"class myVtkInteractorStyleImage : public vtkInteractorStyleImage{public:static myVtkInteractorStyleImage* New();vtkTypeMacro(myVtkInteractorStyleImage, vtkInteractorStyleImage);protected:vtkImageViewer2* ImageViewer;int Slice;int MinSlice;int MaxSlice;public:void SetImageViewer(vtkImageViewer2* imageViewer){this->ImageViewer = imageViewer;this->MinSlice = imageViewer->GetSliceMin();this->MaxSlice = imageViewer->GetSliceMax();this->Slice = (this->MinSlice + this->MaxSlice) / 2;this->ImageViewer->SetSlice(this->Slice);this->ImageViewer->Render();}protected:virtual void OnMouseWheelForward(){if (this->Slice < this->MaxSlice){this->Slice += 1;this->ImageViewer->SetSlice(this->Slice);this->ImageViewer->Render();}}virtual void OnMouseWheelBackward(){if (this->Slice > this->MinSlice){this->Slice -= 1;this->ImageViewer->SetSlice(this->Slice);this->ImageViewer->Render();}}};vtkStandardNewMacro(myVtkInteractorStyleImage);int main(int argc, char* argv[]){if (argc < 2){std::cout << "Usage: " << argv[0] << " DicomDirectory" << std::endl;return EXIT_FAILURE;}auto reader = vtkSmartPointer::New();reader->SetDirectoryName(argv[1]);reader->Update();auto imageViewer = vtkSmartPointer::New();imageViewer->SetInputConnection(reader->GetOutputPort());auto interactor = vtkSmartPointer::New();imageViewer->SetupInteractor(interactor);imageViewer->SetSize(400, 400);imageViewer->SetColorLevel(500);imageViewer->SetColorWindow(1000);imageViewer->SetSliceOrientationToXY();imageViewer->GetRenderer()->SetBackground(1, 1, 1);auto myStyle = vtkSmartPointer::New();myStyle->SetImageViewer(imageViewer);interactor->SetInteractorStyle(myStyle);imageViewer->Render();imageViewer->GetRenderer()->ResetCamera();imageViewer->Render();interactor->Start();return EXIT_SUCCESS;}
来源地址:https://blog.csdn.net/q610098308/article/details/128953330
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